Faculty profile
Markus Geuking
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Research
Latest papers
Spatial mapping of human colonic niches reveals rapid, mucus-specific microbiota disruption after bowel cleansing.
Gut microbes · 2026
Latest funding
- $90,000
Exploring the effects of gut microbial and viral shared epitopes in Inflammatory Bowel Disease
CIHR · 2023 · Supervisor
- $772,650
The role of the microbiome in chronic visceral pain in inflammatory bowel disease
CIHR · 2020 · Co-investigator
- $642,600
Intestinal mesenchymal regulation of mucosal inflammation
CIHR · 2020 · Co-investigator
1 publications.
Spatial mapping of human colonic niches reveals rapid, mucus-specific microbiota disruption after bowel cleansing.
Yilmaz B, Moulin S, Heimgartner B, Li H, Geuking M, Juillerat P, Misselwitz B, Macpherson AJ, Wiest R
Exploring the effects of gut microbial and viral shared epitopes in Inflammatory Bowel Disease
Principal investigators: Ahmadi Dehaghi, Shokouh
Keywords: Colitis Mice Model; Gnotobiotic Mice Model; Inflammatory Bowel Disease; Lymphocytic Choriomeningitis Virus (Lcmv) Infection; Microbiome; Shared Epitopes; T Regulatory Cells
The role of the microbiome in chronic visceral pain in inflammatory bowel disease
Principal investigators: Nasser, Yasmin
Keywords: Calcium Imaging; Chronic Pain; Dss Colitis; Electrophysiology; Inflammatory Bowel Disease; Metabolome; Microbiome; Short Chain Fatty Acids; Trpv1
Intestinal mesenchymal regulation of mucosal inflammation
Principal investigators: Hirota, Simon A
Keywords: Fibroblasts; Indole-3-Propionic Acid; Inflammatory Bowel Diseases; Intestinal Mesenchyme; Intestinal Microbiota; Microbial Metabolites; Pregnane X Receptor; Stromal Cells; T Cells
Integrated Microbiome Platforms for Advancing Causation Testing and Translation (IMPACTT)
Principal investigators: McCoy, Kathy; Arrieta Mendez, Marie-Claire; Beiko, Robert G; Brinkman, Fiona S; Geuking, Markus; Gros, Philippe; Harrison, Joe J; Kozyrskyj, Anita L; Kubes, Paul; Langille, Morgan G; Lewis, Ian A; Madsen, Karen L; Silva, Diego S; Sycuro, Laura K; Wine, Eytan
Keywords: Computational Tools And Analysis; Functional Studies; Gnotobiotic Animal Models; Host-Microbe Interactions; Human Cohort Linkage; Microbial Repositories; Microbiome; Omics Platforms; Research Core; Standardized Protocols
IMPACTT: A Microbiome Research Core based on Integrated Microbiome Platforms for Advancing Causation Testing and Translation
Principal investigators: McCoy, Kathy; Arrieta Mendez, Marie-Claire; Brinkman, Fiona S; Danska, Jayne S; Geuking, Markus; Greenwood, Celia M; Gros, Philippe; Harrison, Joe J; Hsiao, William; Kozyrskyj, Anita L; Kubes, Paul; Lewis, Ian A; Madsen, Karen L; Silva, Diego S; Sycuro, Laura K
Keywords: Computational Tools And Analyses; Functional Studies; Gnotobiotic Animal Models; Host-Microbiome Interactions; Human Cohorts; Microbial Repositories; Microbiome; Omics Platforms; Research Core; Standardized Protocols
Antigen-Specific Crosstalk Between the Microbiota and CD4+ T cells
Principal investigators: Geuking, Markus
Keywords: Cd4 T Cells; Genetic Modification Of Bacteria; Gnotobiology; Immune Regulation; Microbiology; Microbiota; Mouse Models; Mucosal Immunology
From CIHR, NSERC and SSHRC funding decisions: CIHR since 2008, NSERC since 1991 and SSHRC since 1998, including their latest published competition results.
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