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Research
Latest papers
Investigating the evolutionary history of the biosynthetic gene cluster for the cytotoxic purine analog, 6-thioguanine.
Molecular genetics and genomics : MGG · 2026 · senior author
A semi-selective differential medium for identifying strains of Pantoea from environmental samples.
FEMS microbiology letters · 2025 · senior author
The expanding antimicrobial diversity of the genus Pantoea.
Microbiological research · 2024 · senior author
Latest funding
- $144,000
Uncovering the genetic basis for host-specific adaptation and opportunism in the bacterial pathogen, Pantoea
NSERC · 2021 · Principal investigator
- $139,998
Accelerating flax straw decomposition by harnessing natural soil microbes
NSERC · 2021 · Principal investigator
- $32,100
Development of a disinfectant for hatching eggs
NSERC · 2018 · Principal investigator
36 publications.
Investigating the evolutionary history of the biosynthetic gene cluster for the cytotoxic purine analog, 6-thioguanine.
Bateman A, Most K, Stavrinides J
A semi-selective differential medium for identifying strains of Pantoea from environmental samples.
Bateman A, Apperley A, Stavrinides J
The expanding antimicrobial diversity of the genus Pantoea.
Kirk A, Davidson E, Stavrinides J
Distribution and comparative genomic analysis of antimicrobial gene clusters found in Pantoea.
Kirk A, Stavrinides J
Grazing preferences of three species of amoebae on cyanobacteria and green algae.
Weger HG, Polasek AK, Wright DM, Damodaran A, Stavrinides J
A replica plating method for efficient, high-throughput screening of antibiotic gene clusters in bacteria uncovers a holomycin-like cluster in the clinical isolate, Pantoea agglomerans 20KB447973.
Kirk A, Stavrinides J
Corrigendum to: Pantoea Natural Product 3 is encoded by an eight-gene biosynthetic gene cluster and exhibits antimicrobial activity against multi-drug resistant Acinetobacter baumannii and Pseudomonas aeruginosa [Microbiol. Res., 234 (2020)].
Williams AN, Stavrinides J
Phylogenomic analysis of the Erwiniaceae supports reclassification of Kalamiella piersonii to Pantoea piersonii comb. nov. and Erwinia gerundensis to the new genus Duffyella gen. nov. as Duffyella gerundensis comb. nov.
Soutar CD, Stavrinides J
Genetic and evolutionary characterization of the Major Facilitator Superfamily transporters of the antibacterial, Pantoea Natural Product 3.
Williams AN, Stavrinides J
The Integration of Genome Mining, Comparative Genomics, and Functional Genetics for Biosynthetic Gene Cluster Identification.
Williams AN, Sorout N, Cameron AJ, Stavrinides J
Uncovering the genetic basis for host-specific adaptation and opportunism in the bacterial pathogen, Pantoea
Principal investigators: Stavrinides, John
Keywords: virulence; pathogenicity; host-microbe interactions; pathogenomics; pantoea; phylogenetics; evolution
Accelerating flax straw decomposition by harnessing natural soil microbes
Principal investigators: Stavrinides, John J
Keywords: 16S rRNA; applied microbiology; decomposition; flax; ITS; soil communities; soil ecology
Development of a disinfectant for hatching eggs
Principal investigators: Stavrinides, John
Investigation of PNP-3, a natural product antibiotic effective against multi-drug resistant Acinetobacter baumannii
Principal investigators: Williams, Ashley N
Keywords: Acinetobacter Baumannii; Agar Overlay Assay; Antibiotic Discovery And Characterization; Antibiotic Extraction; Comparative Genomics; Genetic Screen; Heterologous Expression; Human Health; Multi-Drug Resistance; Natural Product Antibiotics
Identification of host-specific virulence determinants in the opportunistic enteric pathogen, Pantoea
Principal investigators: Stavrinides, John
Multifunctional microplate readers for assays of cellular activity and molecular quantification
Principal investigators: Cameron, Andrew
The Type Six Secretion System: Characterizing the System in Pantoea agglomerans and Identifying the Role it Plays in Virulence.
Principal investigators: Smith, Derek D
Keywords: Comparison Of Virulence Of Mutants And Parent Strains; Differences Beween Clinical/Environmental Isolates; Gene Knockouts Via Homologous Recombination; Genomic Analysis Of Strains; Pantoea Agglomerans - Screen Strains For T6ss; T6ss As A Central Virulence Factor For Clinical Isolates; T6ss In Biofilm Formation/Crystal Violet Method To Quantify; T6ss Mediated Interbacterial Competition; T6ss Mediated Virulence In Model Hosts; Type Six Secretion System (T6ss)
Using a multi-host bacterial pathogen to understand host-specific adaptation and virulence
Principal investigators: Stavrinides, John
From CIHR, NSERC and SSHRC funding decisions: CIHR since 2008, NSERC since 1991 and SSHRC since 1998, including their latest published competition results.
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