This profile is built from public research funding records (CIHR, NSERC and SSHRC) and PubMed. We have not imported them from a McGill University directory, so their courses and email address may be missing. Find their university profile.
Research
Latest papers
The evolution of health data ecosystems: An international survey.
American journal of human genetics · 2025
Overture: an open-source genomics data platform.
GigaScience · 2025
Author Correction: The landscape of viral associations in human cancers.
Nature genetics · 2023 · senior author
Latest funding
- $14,940,000
The Pan-Canadian Genome Library (PCGL)
CIHR · 2023 · Principal investigator
- $786,249
EUCANCan: a federated network of aligned and interoperable infrastructures for the homogeneous analysis, management and sharing of genomic oncology data for Personalized Medicine.
CIHR · 2018 · Co-investigator
- $133,332
Dockstore: a platform for sharing cloud-agnostic tools with the research community.
CIHR · 2016 · Nominated PI
15 publications.
The evolution of health data ecosystems: An international survey.
Lerner-Ellis JP, Price EM, Subhani S, Boughtwood T, Brion MJ, Rendon A, Cividanes L, Gemmer J, Ciofani D, Bertin N, Wee SS, Robertson S, Baz B, Crameri K, Österle S, Wirta V, Sikora P, Lindstrand A, Nowak F, Amado I, Mulder NJ, Ganna A, Goodhand P, Smith LD, Marshall CR, Zawati M, Ferretti V, Michaud JL, Bulman D, Bernier F, Boycott KM
Overture: an open-source genomics data platform.
Shiell M, Bajari R, Andric D, Eubank J, Chan BF, Richardsson AJ, Ali A, Allabadi B, Alturmessov Y, Baker J, Catton A, Cullion K, DeMaria D, Dos Santos P, Feher H, Gerthoffert F, Ha M, Haw RA, Kachru A, Lepsa A, Li A, Mistry RN, Nahal-Bose HK, Pejovic A, Rich S, Rivera L, Schütte C, Su E, Tisma R, Uddin J, Wang C, Wilmer AN, Xiang L, Zhang J, Stein LD, Ferretti V, Courtot M, Yung CK
Author Correction: The landscape of viral associations in human cancers.
Zapatka M, Borozan I, Brewer DS, Iskar M, Grundhoff A, Alawi M, Desai N, Sültmann H, Moch H, PCAWG Pathogens, Cooper CS, Eils R, Ferretti V, Lichter P, PCAWG Consortium
Molecular and Pathology Features of Colorectal Tumors and Patient Outcomes Are Associated with Fusobacterium nucleatum and Its Subspecies animalis.
Borozan I, Zaidi SH, Harrison TA, Phipps AI, Zheng J, Lee S, Trinh QM, Steinfelder RS, Adams J, Banbury BL, Berndt SI, Brezina S, Buchanan DD, Bullman S, Cao Y, Farris AB, Figueiredo JC, Giannakis M, Heisler LE, Hopper JL, Lin Y, Luo X, Nishihara R, Mardis ER, Papadopoulos N, Qu C, Reid EEG, Thibodeau SN, Harlid S, Um CY, Hsu L, Gsur A, Campbell PT, Gallinger S, Newcomb PA, Ogino S, Sun W, Hudson TJ, Ferretti V, Peters U
Author Correction: The NCI Genomic Data Commons.
Heath AP, Ferretti V, Agrawal S, An M, Angelakos JC, Arya R, Bajari R, Baqar B, Barnowski JHB, Burt J, Catton A, Chan BF, Chu F, Cullion K, Davidsen T, Do PM, Dompierre C, Ferguson ML, Fitzsimons MS, Ford M, Fukuma M, Gaheen S, Ganji GL, Garcia TI, George SS, Gerhard DS, Gerthoffert F, Gomez F, Han K, Hernandez KM, Issac B, Jackson R, Jensen MA, Joshi S, Kadam A, Khurana A, Kim KMJ, Kraft VE, Li S, Lichtenberg TM, Lodato J, Lolla L, Martinov P, Mazzone JA, Miller DP, Miller I, Miller JS, Miyauchi K, Murphy MW, Nullet T, Ogwara RO, Ortuño FM, Pedrosa J, Pham PL, Popov MY, Porter JJ, Powell R, Rademacher K, Reid CP, Rich S, Rogel B, Sahni H, Savage JH, Schmitt KA, Simmons TJ, Sislow J, Spring J, Stein L, Sullivan S, Tang Y, Thiagarajan M, Troyer HD, Wang C, Wang Z, West BL, Wilmer A, Wilson S, Wu K, Wysocki WP, Xiang L, Yamada JT, Yang L, Yu C, Yung CK, Zenklusen JC, Zhang J, Zhang Z, Zhao Y, Zubair A, Staudt LM, Grossman RL
The NCI Genomic Data Commons.
Heath AP, Ferretti V, Agrawal S, An M, Angelakos JC, Arya R, Bajari R, Baqar B, Barnowski JHB, Burt J, Catton A, Chan BF, Chu F, Cullion K, Davidsen T, Do PM, Dompierre C, Ferguson ML, Fitzsimons MS, Ford M, Fukuma M, Gaheen S, Ganji GL, Garcia TI, George SS, Gerhard DS, Gerthoffert F, Gomez F, Han K, Hernandez KM, Issac B, Jackson R, Jensen MA, Joshi S, Kadam A, Khurana A, Kim KMJ, Kraft VE, Li S, Lichtenberg TM, Lodato J, Lolla L, Martinov P, Mazzone JA, Miller DP, Miller I, Miller JS, Miyauchi K, Murphy MW, Nullet T, Ogwara RO, Ortuño FM, Pedrosa J, Pham PL, Popov MY, Porter JJ, Powell R, Rademacher K, Reid CP, Rich S, Rogel B, Sahni H, Savage JH, Schmitt KA, Simmons TJ, Sislow J, Spring J, Stein L, Sullivan S, Tang Y, Thiagarajan M, Troyer HD, Wang C, Wang Z, West BL, Wilmer A, Wilson S, Wu K, Wysocki WP, Xiang L, Yamada JT, Yang L, Yu C, Yung CK, Zenklusen JC, Zhang J, Zhang Z, Zhao Y, Zubair A, Staudt LM, Grossman RL
A user guide for the online exploration and visualization of PCAWG data.
Goldman MJ, Zhang J, Fonseca NA, Cortés-Ciriano I, Xiang Q, Craft B, Piñeiro-Yáñez E, O'Connor BD, Bazant W, Barrera E, Muñoz-Pomer A, Petryszak R, Füllgrabe A, Al-Shahrour F, Keays M, Haussler D, Weinstein JN, Huber W, Valencia A, Park PJ, Papatheodorou I, Zhu J, Ferretti V, Vazquez M
The landscape of viral associations in human cancers.
Zapatka M, Borozan I, Brewer DS, Iskar M, Grundhoff A, Alawi M, Desai N, Sültmann H, Moch H, PCAWG Pathogens, Cooper CS, Eils R, Ferretti V, Lichter P, PCAWG Consortium
The International Cancer Genome Consortium Data Portal.
Zhang J, Bajari R, Andric D, Gerthoffert F, Lepsa A, Nahal-Bose H, Stein LD, Ferretti V
Fostering population-based cohort data discovery: The Maelstrom Research cataloguing toolkit.
Bergeron J, Doiron D, Marcon Y, Ferretti V, Fortier I
The Pan-Canadian Genome Library (PCGL)
Principal investigators: Bourque, Guillaume; Boycott, Kym M; Scherer, Stephen W; Bhérer, Claude; Brazas, Michelle D; Brudno, Michael; Caron, Nadine R; Courtot, Mélanie; Ferretti, Vincent; Joly, Yann; Jones, Steven; Lerner-Ellis, Jordan P; Stedman, Ian; Stein, Lincoln; Wasserman, Wyeth W; Zawati, Ma'n Hilmi M.
Keywords: Clinical Trials; Data Diversity; Data Standards; Database; Federated Network; Genetic Variants; Genetics; Genomics; Human Genomes; Portals
EUCANCan: a federated network of aligned and interoperable infrastructures for the homogeneous analysis, management and sharing of genomic oncology data for Personalized Medicine.
Principal investigators: Stein, Lincoln
Keywords: Big Data; Data Sharing; Databases; Genomics; Precision Medicine; Precision Oncology
Dockstore: a platform for sharing cloud-agnostic tools with the research community.
Principal investigators: Ferretti, Vincent; O'Connor, Brian P
Keywords: Bioinformatics
Research Advancement through Cohort Cataloguing and Harmonization (ReACH)
Principal investigators: Fortier, Isabel; Atkinson, Stephanie A; Bocking, Alan D; Ferretti, Vincent; Fraser, William D
Keywords: Cohorts; Data Discovery; Data Harmonization/Integration; Developmental Origins Of Health And Diseases; Early Life Trajectories; Metadata Catalogue; Open Source Software Development; Pregnancy/Birth Cohorts
The cancer genome collaboratory
Principal investigators: Stein, Lincoln
Keywords: Bioethics; Biostatistics; Cancer; Cloud Computing; Computational Biology; Computer Science; Genomics; Machine Learning
The Cancer Genome Collaboratory
Principal investigators: Stein, Lincoln
Keywords: Bioinformatics; Cancer; Cloud Computing; Genomics; Protection Of Patient Privacy
From CIHR, NSERC and SSHRC funding decisions: CIHR since 2008, NSERC since 1991 and SSHRC since 1998, including their latest published competition results.
Frequent collaborators
- Isabel Fortier and Dany Doiron: 20 shared papers
- Isabel Fortier and Vincent Ferretti: 4 shared papers
- Vincent Ferretti and Dany Doiron: 4 shared papers
- Mathieu Blanchette and Vincent Ferretti: 2 shared papers
- Lincoln Stein and Vincent Ferretti: 2 shared papers
- Lincoln Stein and Steven Gallinger: 1 shared paper
- Isabel Fortier and Ma'n Zawati: 1 shared paper
- Vincent Ferretti and Ma'n Zawati: 1 shared paper
- Vincent Ferretti and Francois Bernier: 1 shared paper
- Vincent Ferretti and Steven Gallinger: 1 shared paper
- Ma'n Zawati and Francois Bernier: 1 shared paper
- Medicine
- Physical Sciences
- Cell Biology and Anatomy
- Medical Biophysics
- Other
Co-authors at McGill University, colored by department. Thicker lines mean more shared papers; select anyone to open their profile and their own map.
Dany Doiron
Medicine
4 shared papers, latest 2018
Isabel Fortier
Faculty
4 shared papers, latest 2018
Mathieu Blanchette
Faculty
2 shared papers, latest 2007
Lincoln Stein
Physical Sciences
2 shared papers, latest 2021
Ma'n Zawati
Faculty
1 shared papers, latest 2025
Francois Bernier
Cell Biology and Anatomy
1 shared papers, latest 2025
Steven Gallinger
Medical Biophysics
1 shared papers, latest 2022
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