Pierre-Marc Jodoin, Université de Sherbrooke

Research

Echocardiography Cardiac imaging Cross-attention networks Deep learning Explainability Image segmentation Medical imaging Motion tracking

Latest papers

Leveraging rotational equivariance for reinforcement learning in tractography.
Medical image analysis · 2026
BundleParc: Consistent white matter bundle parcellation without tractography.
Medical image analysis · 2026 · senior author
Exploring the robustness of TractOracle methods in RL-based tractography.
Medical image analysis · 2025 · senior author

All 30 publications

Latest funding

Fully-automatic, self-corrective, and explainable echocardiographic image analysis
NSERC · 2023 · Principal investigator
$82,000
Model design for analyzing ultra-low framerate surveillance videos
NSERC · 2018 · Principal investigator
$205,000
Development of deep segmentation methods applied to satellite imagery
NSERC · 2017 · Principal investigator
$25,000

All 8 grants and awards

30 publications.

01

Leveraging rotational equivariance for reinforcement learning in tractography.

Sinzinger FL, Théberge A, Jodoin PM, Descoteaux M, Moreno R

Medical image analysis2026

DOI: 10.1016/j.media.2026.104216 PMID: 42579975

02

BundleParc: Consistent white matter bundle parcellation without tractography.

Théberge A, Yamani ZE, Barakovic M, Magon S, Yang JY, Descoteaux M, Rheault F, Jodoin PM

Medical image analysis2026Senior author

DOI: 10.1016/j.media.2026.104087 PMID: 42035559

03

Exploring the robustness of TractOracle methods in RL-based tractography.

Levesque J, Théberge A, Descoteaux M, Jodoin PM

Medical image analysis2025Senior author

DOI: 10.1016/j.media.2025.103743 PMID: 40819588

04

Challenges and best practices when using ComBAT to harmonize diffusion MRI data.

Jodoin PM, Edde M, Girard G, Dumais F, Theaud G, Dumont M, Houde JC, David Y, Descoteaux M, Alzheimer’s Disease Neuroimaging Initiative

Scientific reports2025First author

DOI: 10.1038/s41598-025-25400-x PMID: 41285828

05

Think deep in the tractography game: deep learning for tractography computing and analysis.

Zhang F, Théberge A, Jodoin PM, Descoteaux M, O'Donnell LJ

Brain structure & function2025

DOI: 10.1007/s00429-025-02938-0 PMID: 40522497

06

What matters in reinforcement learning for tractography.

Théberge A, Desrosiers C, Boré A, Descoteaux M, Jodoin PM

Medical image analysis2024Senior author

DOI: 10.1016/j.media.2024.103085 PMID: 38219499

07

FIESTA: Autoencoders for accurate fiber segmentation in tractography.

Dumais F, Legarreta JH, Lemaire C, Poulin P, Rheault F, Petit L, Barakovic M, Magon S, Descoteaux M, Jodoin PM, Alzheimer’s Disease Neuroimaging Initiative

NeuroImage2023Senior author

DOI: 10.1016/j.neuroimage.2023.120288 PMID: 37495198

08

Generative Sampling in Bundle Tractography using Autoencoders (GESTA).

Legarreta JH, Petit L, Jodoin PM, Descoteaux M

Medical image analysis2023

DOI: 10.1016/j.media.2023.102761 PMID: 36773366

09

GANs for Medical Image Synthesis: An Empirical Study.

Skandarani Y, Jodoin PM, Lalande A

Journal of imaging2023

DOI: 10.3390/jimaging9030069 PMID: 36976120

10

TractoInferno - A large-scale, open-source, multi-site database for machine learning dMRI tractography.

Poulin P, Theaud G, Rheault F, St-Onge E, Bore A, Renauld E, de Beaumont L, Guay S, Jodoin PM, Descoteaux M

Scientific data2022

DOI: 10.1038/s41597-022-01833-1 PMID: 36433966

Fully-automatic, self-corrective, and explainable echocardiographic image analysis

Principal investigatorNSERC2023Discovery Grants Program - Individual

Principal investigators: Jodoin, Pierre-Marc

Keywords: deep learning; medical imaging; image segmentation; echocardiography; uncertainty estimation; explainability; cross-attention networks; motion tracking; echocardiography; cardiac imaging

$82,000

Model design for analyzing ultra-low framerate surveillance videos

Principal investigatorNSERC2018Discovery Grants Program - Individual

Principal investigators: Jodoin, Pierre-Marc

$205,000