This profile is built from public research funding records (CIHR, NSERC and SSHRC) and PubMed. We have not imported them from a Simon Fraser University directory, so their courses and email address may be missing. Find their university profile.
Latest papers
SRRM4 Drives Neuroendocrine Transdifferentiation of Prostate Adenocarcinoma Under Androgen Receptor Pathway Inhibition.
European urology · 2017
ORMAN: optimal resolution of ambiguous RNA-Seq multimappings in the presence of novel isoforms.
Bioinformatics (Oxford, England) · 2014
nFuse: discovery of complex genomic rearrangements in cancer using high-throughput sequencing.
Genome research · 2012
Latest funding
- $186,938
A compressed sensing framework for identifying differentially expressed isoforms and transcriptomic aberrations in cancer samples
CIHR · 2012 · Principal investigator
4 publications.
SRRM4 Drives Neuroendocrine Transdifferentiation of Prostate Adenocarcinoma Under Androgen Receptor Pathway Inhibition.
Li Y, Donmez N, Sahinalp C, Xie N, Wang Y, Xue H, Mo F, Beltran H, Gleave M, Wang Y, Collins C, Dong X
ORMAN: optimal resolution of ambiguous RNA-Seq multimappings in the presence of novel isoforms.
Dao P, Numanagić I, Lin YY, Hach F, Karakoc E, Donmez N, Collins C, Eichler EE, Sahinalp SC
nFuse: discovery of complex genomic rearrangements in cancer using high-throughput sequencing.
McPherson A, Wu C, Wyatt AW, Shah S, Collins C, Sahinalp SC
Comrad: detection of expressed rearrangements by integrated analysis of RNA-Seq and low coverage genome sequence data.
McPherson A, Wu C, Hajirasouliha I, Hormozdiari F, Hach F, Lapuk A, Volik S, Shah S, Collins C, Sahinalp SC
A compressed sensing framework for identifying differentially expressed isoforms and transcriptomic aberrations in cancer samples
Principal investigators: Sahinalp, Cenk; Collins, Colin C
Keywords: Cancer; Splice Variants; Transcriptomic Aberrations
From CIHR, NSERC and SSHRC funding decisions: CIHR since 2008, NSERC since 1991 and SSHRC since 1998, including their latest published competition results.
Frequent collaborators
- Urologic Sciences
- Other
Co-authors at Simon Fraser University, colored by department. Thicker lines mean more shared papers; select anyone to open their profile and their own map.
Colin Collins
Urologic Sciences
3 shared papers, latest 2017
Xuesen Dong
Urologic Sciences
1 shared papers, latest 2017
Martin Gleave
Urologic Sciences
1 shared papers, latest 2017
Yuzhuo Wang
Urologic Sciences
1 shared papers, latest 2017
Sohrab Shah
Faculty
1 shared papers, latest 2012
Cenk Sahinalp
Faculty
1 shared papers, latest 2017
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