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Research
Latest papers
SorghumBase: a knowledgebase for sorghum genomics, phenomics, and stakeholder engagement.
Genetics · 2026
Gramene 2025: expanded comparative genomics and pathway resources, integrated search, and pan-genome portals for crop research.
Nucleic acids research · 2026
Nutri-cereal tissue-specific transcriptome atlas during development: Functional integration of gene expression to identify mineral uptake pathways in little millet (Panicum sumatrense).
The Plant journal : for cell and molecular biology · 2024
Latest funding
- $421,000
Global Center: International Research Center for Enhancing Plant Resilience
NSERC · 2024 · Co-investigator
- $104,000
Advancing Socio-Economic Research for Evidence-Informed Public Health Decision-Making: Urban Shade as an Equitable Adaptation Approach to Extreme Heat in Canada
SSHRC · 2023 · Co-investigator
- $126,224
Advanced Platform for Plant Stress Signalling Analysis
NSERC · 2022 · Co-investigator
20 publications.
SorghumBase: a knowledgebase for sorghum genomics, phenomics, and stakeholder engagement.
Gladman N, Olson A, Kumari S, Wei S, Chougule K, Lu Z, Tello-Ruiz MK, Van Buren P, Kumar V, Zhang L, Olson A, Kim C, Braynen J, Hayes C, Xin Z, Klein R, Rooney W, Provart N, Pasha A, O'Meara A, Shakoor N, Michael TP, Harrison M, Ware D
Gramene 2025: expanded comparative genomics and pathway resources, integrated search, and pan-genome portals for crop research.
Olson A, Kumari S, Wei X, Chougule K, Lu Z, Tello-Ruiz MK, Kumar V, Van Buren P, Olson A, Kim C, Braynen J, Zhang L, Dyer S, Alvarez-Jarreta J, Saraf S, Contreras-Moreira B, Naamati G, Ernst C, Papatheodorou I, George N, Jaiswal P, Naithani S, Gupta P, Elser J, D'Eustachio P, Assmann SM, Ferrero-Serrano Á, Pasha A, Provart N, Gladman N, Ware D
Nutri-cereal tissue-specific transcriptome atlas during development: Functional integration of gene expression to identify mineral uptake pathways in little millet (Panicum sumatrense).
Pahari S, Vaid N, Soolanayakanahally R, Kagale S, Pasha A, Esteban E, Provart N, Stobbs JA, Vu M, Meira D, Karunakaran C, Boda P, Prasannakumar MK, Nagaraja A, Jain AK
The cacao gene atlas: a transcriptome developmental atlas reveals highly tissue-specific and dynamically-regulated gene networks in Theobroma cacao L.
Kulesza E, Thomas P, Prewitt SF, Shalit-Kaneh A, Wafula E, Knollenberg B, Winters N, Esteban E, Pasha A, Provart N, Praul C, Landherr L, dePamphilis C, Maximova SN, Guiltinan MJ
Laser Capture Microdissection Transcriptome Reveals Spatiotemporal Tissue Gene Expression Patterns of Medicago truncatula Roots Responding to Rhizobia.
Schnabel E, Thomas J, El-Hawaz R, Gao Y, Poehlman WL, Chavan S, Pasha A, Esteban E, Provart N, Feltus FA, Frugoli J
Multi-omics atlas of combinatorial abiotic stress responses in wheat.
Da Ros L, Bollina V, Soolanayakanahally R, Pahari S, Elferjani R, Kulkarni M, Vaid N, Risseuw E, Cram D, Pasha A, Esteban E, Konkin D, Provart N, Nambara E, Kagale S
Cross-stress gene expression atlas of Marchantia polymorpha reveals the hierarchy and regulatory principles of abiotic stress responses.
Tan QW, Lim PK, Chen Z, Pasha A, Provart N, Arend M, Nikoloski Z, Mutwil M
First Plant Cell Atlas symposium report.
Rice SL, Lazarus E, Anderton C, Birnbaum K, Brophy J, Cole B, Dickel D, Ehrhardt D, Fahlgren N, Frank M, Haswell E, Huang SC, Leiboff S, Libault M, Otegui MS, Provart N, Uhrig RG, Rhee SY, Plant Cell Atlas Consortium
Elevated tyrosine results in the cytosolic retention of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase in Arabidopsis thaliana.
Kanaris M, Poulin J, Shahinas D, Johnson D, Crowley VM, Fucile G, Provart N, Christendat D
The red flower wintersweet genome provides insights into the evolution of magnoliids and the molecular mechanism for tepal color development.
Shen Z, Li W, Li Y, Liu M, Cao H, Provart N, Ding X, Sun M, Tang Z, Yue C, Cao Y, Yuan D, Zhang L
Global Center: International Research Center for Enhancing Plant Resilience
Principal investigators: Wilkins, Olivia O
Keywords: bioinformatics; chemical ontologies; chemical synthesis; computational biology; consumer behaviour; metabolomics; natural products; risk perception; spatial transcriptomics
Advancing Socio-Economic Research for Evidence-Informed Public Health Decision-Making: Urban Shade as an Equitable Adaptation Approach to Extreme Heat in Canada
Principal investigators: Grant, Lauren
Keywords: Advancing Socio-Economic Research for Evidence-Informed Public Health Decision-Making; Shade; Heat Mitigation; Climate Change Adaptation; Mortality; Heat-related Illness; Canada
Advanced Platform for Plant Stress Signalling Analysis
Principal investigators: Yoshioka, Keiko
Understanding drought tolerance with cell-type specific-data sets and computational approaches
Principal investigators: Provart, Nicholas
ePlant Pipeline and Navigator for Accessing and Integrating Multi-Level 'Omics Data for 15 Agronomically-Important Species for Hypothesis Generationion.
Principal investigators: Provart, Nicholas J
Keywords: Bioinformatics
New Cell Type-Specific Data Sets and Computational Approaches for Plant Stress Biology
Principal investigators: Provart, Nicholas
Integrating large biological data sets in pedagogical software
Principal investigators: Provart, Nicholas
Hypothesis generation for plant biology: enabling cyberinfrastructure and experimental validation
Principal investigators: Provart, Nicholas
High-throughput DNA sequencer for the analysis of genome evolution & function
Principal investigators: Guttman, David
Bioinformatics-based hypothesis generation with biological validation for plant stress biology
Principal investigators: Provart, NicholasJames
From CIHR, NSERC and SSHRC funding decisions: CIHR since 2008, NSERC since 1991 and SSHRC since 1998, including their latest published competition results.
Frequent collaborators
- Alan Moses and Nicholas Provart: 1 shared paper
- Alan Moses and Ji-Young Youn: 1 shared paper
- Nicholas Provart and Edwin Wang: 1 shared paper
- Nicholas Provart and Ji-Young Youn: 1 shared paper
- Cell and Systems Biology
- Biochemistry and Molecular Biology
- Molecular Medicine
- Other
Co-authors at University of Toronto, colored by department. Thicker lines mean more shared papers; select anyone to open their profile and their own map.
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