Faculty profile
Hamed Najafabadi
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Read how they describe their research on their McGill University profile.
Latest papers
GHT-SELEX demonstrates unexpectedly high intrinsic sequence specificity and complex DNA binding of many human transcription factors
Nature Methods · 2026
Extensive binding of poorly characterized human transcription factors to genomic dark matter
Nature Communications · 2026
Single-cell gene programs define subtype identity and metastatic trajectories in renal cell carcinoma
medRxiv · 2026 · senior author
From the 150 most recent of 169 publications.
GHT-SELEX demonstrates unexpectedly high intrinsic sequence specificity and complex DNA binding of many human transcription factors
Arttu Jolma, Aldo Hernández-Corchado, Ally W. H. Yang, Ali Asghar Fathi, Kaitlin U. Laverty, Alexander V. Brechalov, Rozita Razavi, Mihai Tudor Albu, Hong Zheng, Philipp Bucher, Bart Deplancke, Oriol Fornés, Jan Grau, Ivo Grosse, Fedor A. Kolpakov, Vsevolod J. Makeev, Marjan Barazandeh, Zhenfeng Deng, Chun Hu, Samuel A. Lambert, Zain M. Patel, Sara E. Pour, Mikhail Salnikov, Isaac Yellan, G. A. Meshcheryakov, Giovanna Ambrosini, Antoni J. Gralak, Sachi Inukai, Judith F. Kribelbauer, Marie-Luise Plescher, et al. (51 authors)
Extensive binding of poorly characterized human transcription factors to genomic dark matter
Rozita Razavi, Ali Fathi, Isaac Yellan, Alexander Brechalov, Kaitlin U. Laverty, Arttu Jolma, Aldo Hernández-Corchado, Hong Zheng, Ally W. H. Yang, Mihai Albu, Marjan Barazandeh, Chun Hu, Ilya E. Vorontsov, Zain M. Patel, Bart Deplancke, Oriol Fornés, Jan Grau, Ivo Große, Fedor A. Kolpakov, Vsevolod J. Makeev, Zhenfeng Deng, Samuel A. Lambert, Sara E. Pour, Mikhail Salnikov, G. A. Meshcheryakov, Giovanna Ambrosini, Antoni J. Gralak, Sachi Inukai, Judith F. Kribelbauer, Marie-Luise Plescher, et al. (51 authors)
Single-cell gene programs define subtype identity and metastatic trajectories in renal cell carcinoma
Ariel Madrigal Aguirre, Minjun Kim, Zohreh Mehrjoo, Tamiko Nishimura, Özge Saatci, Adrien Osakwe, Evelyn Zavacky, Elham Moslemi, Kate I. Glennon, Matthew Dankner, Sarah M. Maritan, Hellen Kuasne, Virginie Pilon, Anie Monast, Mustafa Soytaş, Madeleine Arseneault, Spyridon Oikonomopoulos, Ashot Harutyunyan, Tianyuan Lu, Roni Rayes, Larisa M. Soto, Aldo Hernández-Corchado, Jonathan David Spicer, Kevin Petrecca, Peter Siegel, Morag Park, Jiannis Ragoussis, Ozgur Sahin, Fadi Brimo, Simon Tanguay, et al. (32 authors)
TCF4 Mediates PHF6 Transcriptional Regulation of Neural Stem Cells in the Developing Brain, a Mechanism Disrupted in Börjeson–Forssman–Lehmann Syndrome (BFLS)
Behnaz Nateghi, Yunqiao Li, Dianbo Qu, Dilan Rasool, Ariel Madrigal, Hamed Shateri Najafabadi, Pierre Mattar, Vahab D. Soleimani, Azad Bonni, Arezu Jahani‐Asl
Semantic fragment representations for coordinate-free analysis of genomics data
Hamed Heydari, Jing Zhao, Madeleine Arseneault, Leila Younesian, Simon Tanguay, Yasser Riazalhosseini, Hani Goodarzi, Hamed Shateri Najafabadi
A Multiomic Analysis of Cachectic Mice Reveals Cancer Driven Suppression of Muscle Stem Cell Differentiation
Darren M. Blackburn, Aldo Hernández-Corchado, Korin Sahinyan, Hedieh Habibi Khorasani, Felicia Lazure, Vincent R. Richard, Dianbo Qu, Shuo Wang, Christoph H. Borchers, Arezu Jahani‐Asl, Hamed Shateri Najafabadi, Antonis E. Koromilas, Vahab D. Soleimani
Non-canonical ribosome organization enables translation stalling in neuronal RNA granules
Jingyu Sun, Lily Drever, Laura Bohorquez, Najia Bouaddouch, Jewel T-Y Li, Thibault Legal, Aldo Hernández-Corchado, Shuaiqi Guo, Khanh Huy Bui, Hamed Shateri Najafabadi, Wayne S. Sossin, Joaquı́n Ortega
Abstract 2184: Defining cancer initiating cells and their vulnerabilities in renal cell carcinoma.
Zohreh Mehrjoo, Hellen Kuasne, Ariel Madrigal Aguirre, Özge Saatci, Ali Shahini, Matthew G. Annis, Anne-Marie N. Fortier, Tianyuan Lu, Larisa M. Soto, Hong Yun Zhao, D. Zuo, Virginie Pilon, Matthew Dankner, Tamiko Nishimura, Kevin Petrecca, Jonathan David Spicer, Peter M. Siegel, Simon Tanguay, Hamed Shateri Najafabadi, Sahin Özgür, Morag Park, Yasser Riazalhosseini
Preprocessed data for "A Latent Space Thermodynamic Model of Cell Differentiation" manuscript
Ali Poursina, Shayan Hajhashemi, Alihossein Saberi, Arsham Mikaeili Namini, Amin Emad, Hamed Shateri Najafabadi
A Latent Space Thermodynamic Model of Cell Differentiation
Ali Poursina, Shayan Hajhashemi, Arsham Mikaeili Namini, Alihossein Saberi, Amin Emad, Hamed Shateri Najafabadi
Frequent collaborators
- Hamed Shateri Najafabadi and Hamed Najafabadi: 169 shared papers
- Sidong Huang and Morag Park: 120 shared papers
- Mark Lathrop and Yasser Riazalhosseini: 63 shared papers
- Peter Siegel and Morag Park: 48 shared papers
- Morag Park and Daniela Quail: 34 shared papers
- Sidong Huang and Daniela Quail: 30 shared papers
- Peter Siegel and Ian Watson: 29 shared papers
- Vahab Soleimani and Arezu Jahani-Asl: 27 shared papers
- Yasser Riazalhosseini and Hamed Shateri Najafabadi: 25 shared papers
- Yasser Riazalhosseini and Hamed Najafabadi: 25 shared papers
- Morag Park and Sarkis Meterissian: 22 shared papers
- Ari Meguerditchian and Sarkis Meterissian: 21 shared papers
- Timothy Hughes and Hamed Shateri Najafabadi: 20 shared papers
- Timothy Hughes and Hamed Najafabadi: 20 shared papers
- Catalin Mihalcioiu and Ian Watson: 17 shared papers
- Anne-Marie Mes-Masson and Réjean Lapointe: 17 shared papers
- Anne-Marie Mes-Masson and John Stagg: 17 shared papers
- Vahab Soleimani and Hamed Shateri Najafabadi: 16 shared papers
- Vahab Soleimani and Hamed Najafabadi: 16 shared papers
- Hamed Shateri Najafabadi and Arezu Jahani-Asl: 14 shared papers
- Arezu Jahani-Asl and Hamed Najafabadi: 14 shared papers
- Morag Park and Ian Watson: 13 shared papers
- Theodore Perkins and Vahab Soleimani: 12 shared papers
- Morag Park and Hamed Najafabadi: 12 shared papers
- Hamed Shateri Najafabadi and Reza Salavati: 12 shared papers
- Reza Salavati and Hamed Najafabadi: 12 shared papers
- Réjean Lapointe and John Stagg: 12 shared papers
- Philip Kim and Michael Garton: 11 shared papers
- Sidong Huang and Janusz Rak: 11 shared papers
- Catalin Mihalcioiu and Peter Siegel: 11 shared papers
- Peter Siegel and Daniela Quail: 11 shared papers
- Catalin Mihalcioiu and Morag Park: 10 shared papers
- Catalin Mihalcioiu and René Zahedi: 10 shared papers
- Janusz Rak and Yasser Riazalhosseini: 9 shared papers
- Peter Siegel and Anne-Marie Mes-Masson: 9 shared papers
- Theodore Perkins and Hamed Shateri Najafabadi: 7 shared papers
- Theodore Perkins and Arezu Jahani-Asl: 7 shared papers
- Theodore Perkins and Hamed Najafabadi: 7 shared papers
- Peter Siegel and Hamed Najafabadi: 7 shared papers
- Sarkis Meterissian and Réjean Lapointe: 7 shared papers
- Sarkis Meterissian and John Stagg: 7 shared papers
- Philip Kim and Hamed Shateri Najafabadi: 6 shared papers
- Philip Kim and Hamed Najafabadi: 6 shared papers
- Ian Watson and Hamed Najafabadi: 6 shared papers
- Hamed Shateri Najafabadi and Michael Garton: 6 shared papers
- Michael Garton and Hamed Najafabadi: 6 shared papers
- Philip Kim and Timothy Hughes: 5 shared papers
- Thomas Duchaine and Hamed Shateri Najafabadi: 5 shared papers
- Thomas Duchaine and Hamed Najafabadi: 5 shared papers
- Janusz Rak and Morag Park: 5 shared papers
- Daniela Quail and Hamed Najafabadi: 5 shared papers
- Sarkis Meterissian and Hamed Najafabadi: 5 shared papers
- Thomas Duchaine and Yasser Riazalhosseini: 4 shared papers
- Sidong Huang and Mark Lathrop: 4 shared papers
- Sidong Huang and Hamed Najafabadi: 4 shared papers
- Catalin Mihalcioiu and Ari Meguerditchian: 4 shared papers
- Catalin Mihalcioiu and Hamed Najafabadi: 4 shared papers
- Mark Lathrop and Hamed Shateri Najafabadi: 4 shared papers
- Mark Lathrop and Hamed Najafabadi: 4 shared papers
- Janusz Rak and Hamed Najafabadi: 4 shared papers
- Ari Meguerditchian and Anne-Marie Mes-Masson: 4 shared papers
- Ari Meguerditchian and Hamed Najafabadi: 4 shared papers
- Anne-Marie Mes-Masson and Hamed Najafabadi: 4 shared papers
- Hamed Shateri Najafabadi and René Zahedi: 4 shared papers
- Réjean Lapointe and Hamed Najafabadi: 4 shared papers
- René Zahedi and Hamed Najafabadi: 4 shared papers
- Hamed Najafabadi and John Stagg: 4 shared papers
- Department of Human Genetics
- Department of Biochemistry
- Terrence Donnelly Centre for Cellular and Biomolecular Research
- Lady Davis Institute
- Department of Cellular and Molecular Medicine
- Parasitology
- Goodman Cancer Institute
- Other
Co-authors at McGill University, colored by department. Thicker lines mean more shared papers; select anyone to open their profile and their own map.
Hamed Shateri Najafabadi
Department of Human Genetics
169 shared papers, latest 2026
Yasser Riazalhosseini
Department of Human Genetics
25 shared papers, latest 2026
Timothy Hughes
Terrence Donnelly Centre for Cellular and Biomolecular Research
20 shared papers, latest 2026
Vahab Soleimani
Lady Davis Institute
16 shared papers, latest 2026
Kevin Petrecca
Department of Neurology and Neurosurgery
16 shared papers, latest 2026
Arezu Jahani-Asl
Department of Cellular and Molecular Medicine
14 shared papers, latest 2026
Morag Park
Department of Biochemistry
12 shared papers, latest 2026
Reza Salavati
Parasitology
12 shared papers, latest 2017
Peter Siegel
Goodman Cancer Institute
7 shared papers, latest 2026
Theodore Perkins
Biochemistry, Microbiology and Immunology
7 shared papers, latest 2023
Ian Watson
Department of Biochemistry
6 shared papers, latest 2023
Quaid Morris
Faculty of Medicine / Computer Science
6 shared papers, latest 2026
Michael Garton
Biomedical Engineering
6 shared papers, latest 2017
Philip Kim
Terrence Donnelly Centre for Cellular and Biomolecular Research
6 shared papers, latest 2017
Sarkis Meterissian
Gerald Bronfman Department of Oncology
5 shared papers, latest 2025
Daniela Quail
Goodman Cancer Institute, Physiology
5 shared papers, latest 2024
Thomas Duchaine
Department of Biochemistry
5 shared papers, latest 2024
John Stagg
Goodman Cancer Institute, Microbiology and Immunology
4 shared papers, latest 2025
Ari Meguerditchian
Oncology
4 shared papers, latest 2024
Sidong Huang
Department of Biochemistry
4 shared papers, latest 2018
Catalin Mihalcioiu
Department of Medicine
4 shared papers, latest 2025
George Zogopoulos
Goodman Cancer Institute
1 shared papers, latest 2016
Pierre Fiset
Department of Anesthesia
1 shared papers, latest 2025
Matthew Cheung
Department of Medicine
1 shared papers, latest 2025
John Waldron
Department of Radiation Oncology
1 shared papers, latest 2025
Dale Brown
Department of Otolaryngology-Head & Neck Surgery
1 shared papers, latest 2025
Jim Woodgett
Department of Medical Biophysics
1 shared papers, latest 2025
Ming Tsao
Department of Medical Biophysics
1 shared papers, latest 2025
Ebba Kurz
Department of Pharmacology and Toxicology
1 shared papers, latest 2025
Saima Hassan
Département de chirurgie
1 shared papers, latest 2025
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Profile data last refreshed on September 29, 2026 from the university directory, publication records and public research funding records.