This profile is built from public research funding records (CIHR, NSERC and SSHRC) and PubMed. We have not imported them from a University of Toronto directory, so their courses may be missing. Find their university profile.
Research
Latest papers
The 2025 Westlake Autumn Symposium for AI Proteomics and Virtual Cell.
Genomics, proteomics & bioinformatics · 2026
Role of Pbr1, a putative oxidoreductase, in the ER quality control and folding of yeast Fks1 glucan synthase.
Proceedings of the National Academy of Sciences of the United States of America · 2026
The Nematicide Tioxazafen Disrupts Proteasome Function via Cytochrome P450 Bioactivation.
bioRxiv : the preprint server for biology · 2026
Latest funding
- $1,178,100
Mapping genetic suppression interaction networks in yeast and human cells
CIHR · 2023 · Nominated PI
- $1,231,650
Exploring genetic network dynamics in the context of diverse genetic backgrounds
CIHR · 2022 · Nominated PI
- $45,000
Decoding the molecular basis of natural aging using deep learning
CIHR · 2022 · Supervisor
62 publications.
The 2025 Westlake Autumn Symposium for AI Proteomics and Virtual Cell.
Sun 孙瑞 R, Aebersold R, Xiao 肖琦 Q, Mann M, Zhou 周岩 Y, Heck AJR, Wang 王瑛睿 Y, Völker U, Cai 蔡雪 X, Boone C, Zhou 周梓卓 Z, Li 李明 M, Dong 董振 Z, Andrews B, Wang 王帅尧 S, Schacherer J, Jimenez CR, Wollscheid B, Yue 岳靓 L, Collins BC, Jiang 蒋恒 H, Wang 王栋 D, Qian 钱鎏佳 L, Yue 岳家兴 JX, Sun 孙莹莹 Y, Nice E, Zhang 张晓帆 X, Perez-Riverol Y, A 阿俊 J, Sander C, Hermjakob H, Bittremieux W, Goh WWB, Gao 高歌 G, Zhou 周沛劼 P, Sun 孙思琦 S, Wen 温翰 H, Xu 许梓妍 Z, Guo 郭天南 T
Role of Pbr1, a putative oxidoreductase, in the ER quality control and folding of yeast Fks1 glucan synthase.
Obara K, Okada H, Tan G, Ohnuki S, Suzuki G, Ohtake H, Kubo K, Ghanegolmohammadi F, Ishizaka S, Yashiroda Y, Okita A, Mishiro-Sato E, Suzuki K, Tamura Y, Ashine R, Ikeda Y, Kamura T, van Leeuwen J, Andrews B, Bi E, Noda NN, Boone C, Ohya Y
The Nematicide Tioxazafen Disrupts Proteasome Function via Cytochrome P450 Bioactivation.
Chen L, Thompson K, Kamal M, Sihuta K, Topalidou I, Burns AR, Farshour NH, Cooke B, Knox J, Jiang Y, Qasser MA, Shuteriqi E, Usaj M, Ching J, Flaget A, Costanzo M, Tan G, Lacoste J, Lautens M, Andrews B, Boone C, Taipale M, Lehrbach NJ, Roy PJ
Towards the construction of a virtual yeast.
Qian L, Zhou Z, Zhou P, Dong Z, Zhang X, Dai Z, Gao Z, Sun S, Roy KR, Wang S, Zamboni N, Boone C, Costanzo M, Li J, Liti G, Yue JX, Ralser M, Williams E, Zampieri M, Jiang H, Wu T, Wang Y, Li F, Schacherer J, Sun R, Li Z, Deng Y, Chen Y, Xie Z, Lou H, Wang X, Xie L, Wen H, Chen L, Lei K, Rosenberger G, Cai X, Wang Y, Xiao Q, Shen H, Liu G, Ma L, Andrews B, Lu H, Piatkevich K, Zhu Y, Bai L, Cai Y, Chen Y, E W, Gao G, He F, Chen L, Li SZ, Ma H, Qiao L, Steinmetz LM, Tang L, Tang T, Zhang X, Yang J, Yang Y, Yu K, Zeng J, Zheng Y, Zhou B, Guo T
Orobas: A computational approach for scoring and analysis of quantitative chemical-genetic interactions from CRISPR-Cas9 screens.
Hassan AZ, Zhang X, Ward HN, Billmann M, Bajjali S, Brown KR, Bhojoo U, Chan K, Lin K, Costanzo M, Andrews B, Boone C, Moffat J, Myers CL
Global genetic interaction network of a human cell maps conserved principles and informs functional interpretation of gene co-essentiality profiles.
Billmann M, Costanzo M, Zhang X, Hassan AZ, Rahman M, Brown KR, Chan KS, Tong AHY, Pons C, Ward HN, Ross C, van Leeuwen J, Aregger M, Lawson KA, Mair B, Roth AF, Sen NE, Forster DT, Tan G, Mero P, Masud SN, Lee Y, Aguilera-Uribe M, Ušaj M, Almeida SMT, Aulakh K, Bhojoo U, Birkadze S, Budijono N, Cai X, Caumanns JJ, Chalmers JJ, Chandrashekhar M, Chang D, Climie R, Dasgupta K, Drazic A, Echenique JIR, Gacesa R, Farias AG, Habsid A, Horecka I, Kantautas K, Ji F, Kim DK, Lee SY, Liang W, Lim HJ, Lin K, Lu X, Maier M, Nami B, Nixon A, Mikolajewicz N, Mokhtaridoost M, Nedyalkova L, Rohde T, Rodrigues MS, Soste M, Schultz E, Wang W, Seetharaman A, Shuteriqi E, Sizova O, Taylor DT, Tereshchenko M, Tieu D, Turowec J, Ubhi T, Varland S, Wang KE, Wang ZY, Wei J, Xiao YX, Maass PG, Reversade B, Brown GW, Cravatt BF, Dixon SJ, Wyatt HDM, Röst HL, Roth FP, Xia T, Bader GD, Loewith R, Davis NG, Andrews B, Myers CL, Moffat J, Boone C
Expanding TheCellMap.org to visualize a genome-scale genetic interaction network for a human cell line.
Horecka I, Ušaj M, Masinas MPD, Ward HN, Zhang X, Hassan AZ, Billmann M, Röst HL, Myers CL, Costanzo M, Andrews B, Boone C
Domestication drives repeated evolution of sexual-asexual life cycle trade-offs in yeast.
Becerra-Rodríguez C, Thiele P, Brach G, Dutta A, Garin M, Tan G, Loegler V, Friedrich A, Andrews B, Boone C, Schacherer J, Hou J
Quantitative analysis of genetic interactions in human cells from genome-wide CRISPR-Cas9 screens.
Billmann M, Costanzo M, Rahman M, Chan K, Yan Tong AH, Ward HN, Hassan AZ, Zhang X, Brown KR, Rohde T, Shaw AH, Ross C, van Leeuwen J, Aregger M, Lawson K, Mair B, Mero P, Usaj M, Andrews B, Boone C, Moffat J, Myers CL
Harmonizing the Generation and Pre-publication Stewardship of FAIR bioimage data.
Bialy N, Alber F, Andrews B, Angelo M, Beliveau B, Bintu L, Boettiger A, Boehm U, Brown CM, Maina MB, Chambers JJ, Cimini BA, Eliceiri K, Errington R, Faklaris O, Gaudreault N, Germain RN, Goscinski W, Grunwald D, Halter M, Hanein D, Hickey JW, Lacoste J, Laude A, Lundberg E, Ma J, Malacrida L, Moore J, Nelson G, Neumann EK, Nitschke R, Onami S, Pimentel JA, Plant AL, Radtke AJ, Sabata B, Schapiro D, Schöneberg J, Spraggins JM, Sudar D, Vierdag WAM, Volkmann N, Wählby C, Wang SS, Yaniv Z, Strambio-De-Castillia C
Mapping genetic suppression interaction networks in yeast and human cells
Principal investigators: Andrews, Brenda J
Keywords: Functional Genomics; Genetics; Network Biology
Exploring genetic network dynamics in the context of diverse genetic backgrounds
Principal investigators: Andrews, Brenda J
Keywords: Complex Genetics; Functional Genomics; Genetic Interactions; Genetic Suppressors; Missing Heritability; Yeast Genetics
Decoding the molecular basis of natural aging using deep learning
Principal investigators: Litsios, Athanasios
Keywords: Cell-To-Cell Variability In Aging Trajectories; Cellular Aging; Deep Learning; Live-Cell Imaging Data
Mapping Biological Pathways using Systematic Genetics and Single Cell Imaging
Principal investigators: Andrews, Brenda J
Keywords: Automated Imaging; Functional Genomics; Genetic Networks; Genetic Penetrance; High Content Screening; Network Biology; Single Cell Image Analysis
Canada Reserch Chair - Tier 1
Principal investigators: Andrews, Brenda J
Keywords: Crc
Mapping the Human Apoptosis Genetic Interaction Network
Principal investigators: Mair, Barbara
Keywords: Apoptosis; Crispr Screening; Functional Genomics; Genetic Interactions; Network; Systems Biology
Systems Genetics & Cell Biology: Mapping Biological Pathways in the Eukaryotic Cell
Principal investigators: Andrews, Brenda J
Keywords: Automated Imaging; Cell Cycle Regulation; Functional Genomics; Gene Expression; Genetic Interactions; Genetic Networks; Molecular Biology; Phenomics; Systems Biology; Yeast Genomics
Large-scale analysis of complex genetic suppression networks
Principal investigators: Boone, Charles M
Keywords: Complex Genetic Disease; Complex Traits; Functional Genomics; Genetic Interactions; Suppression; Yeast Genetics
Exploration of conditional genetic interaction reveals unforeseen link between DNA damage repair and cell polarization
Principal investigators: Messier, Vincent
Keywords: Conditional Genetetic Interaction; Dna Damage Repair; Genetic Inherited Diseases
Gene duplication and functional divergence: using systematic genetics to link genotype to phenotype
Principal investigators: Andrews, Brenda J
Keywords: Complex Genetic Disease; Complex Genetics; Computational Biology; Gene Duplication; Genetic Networks; Genome Evolution; Yeast Genetics
From CIHR, NSERC and SSHRC funding decisions: CIHR since 2008, NSERC since 1991 and SSHRC since 1998, including their latest published competition results.
Frequent collaborators
- Brenda Andrews and Charles Boone: 39 shared papers
- Charles Boone and Jason Moffat: 22 shared papers
- Anne-Claude Gingras and Brian Raught: 21 shared papers
- Laurence Pelletier and Anne-Claude Gingras: 16 shared papers
- Laurence Pelletier and Brian Raught: 13 shared papers
- Anne-Claude Gingras and Charles Boone: 12 shared papers
- Anne-Claude Gingras and Mikko Taipale: 12 shared papers
- Anne-Claude Gingras and Jason Moffat: 12 shared papers
- Anne-Claude Gingras and Ji-Young Youn: 12 shared papers
- Andrew Emili and Zhaolei Zhang: 8 shared papers
- Brenda Andrews and Jason Moffat: 6 shared papers
- Charles Boone and Elena Kuzmin: 6 shared papers
- Charles Boone and Zhaolei Zhang: 6 shared papers
- Anne-Claude Gingras and Brenda Andrews: 5 shared papers
- Robert Rottapel and Jason Moffat: 5 shared papers
- Brian Raught and Jason Moffat: 5 shared papers
- Laurence Pelletier and Jason Moffat: 4 shared papers
- Anne-Claude Gingras and Robert Rottapel: 4 shared papers
- Anne-Claude Gingras and Andrew Emili: 4 shared papers
- Robert Rottapel and Brian Raught: 4 shared papers
- Charles Boone and Andrew Emili: 4 shared papers
- Anne-Claude Gingras and Igor Stagljar: 3 shared papers
- Anne-Claude Gingras and Elena Kuzmin: 3 shared papers
- Brenda Andrews and Philip Hieter: 3 shared papers
- Brenda Andrews and Ji-Young Youn: 3 shared papers
- Charles Boone and Igor Stagljar: 3 shared papers
- Charles Boone and Ji-Young Youn: 3 shared papers
- Igor Stagljar and Andrew Emili: 3 shared papers
- Brian Raught and Mikko Taipale: 3 shared papers
- Philip Hieter and Jason Moffat: 3 shared papers
- Anne-Claude Gingras and Zhaolei Zhang: 2 shared papers
- Brenda Andrews and Elena Kuzmin: 2 shared papers
- Brenda Andrews and Zhaolei Zhang: 2 shared papers
- Laurence Pelletier and Brenda Andrews: 1 shared paper
- Anne-Claude Gingras and David Hess: 1 shared paper
- Robert Rottapel and Brenda Andrews: 1 shared paper
- Brenda Andrews and Igor Stagljar: 1 shared paper
- Brenda Andrews and Brian Raught: 1 shared paper
- Brenda Andrews and Andrew Emili: 1 shared paper
- Brenda Andrews and Mikko Taipale: 1 shared paper
- Brenda Andrews and David Hess: 1 shared paper
- Charles Boone and David Hess: 1 shared paper
- Donnelly Centre
- Molecular Genetics
- Genetics and Genome Biology
- Department of Molecular Genetics
- Molecular Medicine
- Michael Smith Laboratories
- Biology
- Other
Co-authors at University of Toronto, colored by department. Thicker lines mean more shared papers; select anyone to open their profile and their own map.
Charles Boone
Donnelly Centre
39 shared papers, latest 2026
Jason Moffat
Genetics and Genome Biology
6 shared papers, latest 2026
Anne-Claude Gingras
Department of Molecular Genetics
5 shared papers, latest 2016
Philip Hieter
Michael Smith Laboratories
3 shared papers, latest 2023
Ji-Young Youn
Molecular Medicine
3 shared papers, latest 2017
Zhaolei Zhang
Terrence Donnelly Centre for Cellular and Biomolecular Research
2 shared papers, latest 2012
Elena Kuzmin
Biology
2 shared papers, latest 2023
Andrew Emili
Banting and Best Department of Medical Research
1 shared papers, latest 2013
Brian Raught
Research Institute
1 shared papers, latest 2016
Igor Stagljar
Biochemistry
1 shared papers, latest 2016
David Hess
Cardiac Surgery
1 shared papers, latest 2010
Mikko Taipale
Donnelly Centre
1 shared papers, latest 2026
Laurence Pelletier
Lunenfeld-Tanenbaum Research Institute
1 shared papers, latest 2013
Robert Rottapel
Medical Biophysics
1 shared papers, latest 2013
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